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The GMOD-DBSF base module is an expandable community resource that decreases development time of Drupal modules for bioinformatics.
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Third, we present genes4all_experiment, which exemplifies how our work supports the wider research community.Ĭonclusion: Given the infrastructure presented here, the Drupal CMS may become a powerful new tool set for bioinformaticians. An innovative graphical user interface (GUI) guides both use and administration of the software, including the secure provision of pre-publication datasets.
#Gmod file exists software#
Second, the Drupal Bioinformatic Software Bench (biosoftware_bench) allows for a rapid and secure deployment of bioinformatic software.
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First, GMOD-DBSF is an application programming interface module for the Drupal CMS that simplifies the programming of bioinformatic Drupal modules. Results: We present a bioinformatic framework for the Drupal CMS. It lacks, however, a robust online solution that can deploy heterogeneous data and software within a Web content management system (CMS). The general model organism database (GMOD) tool kit ( ) has produced a number of resources aimed at addressing this issue. As a result, there is now a pronounced bioinformatic bottleneck. Motivation: Next-generation sequencing technologies have led to the widespread use of -omic applications.